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Bibliography

    Total Citations: 19



::  B  ::

Bergsten, J. 2005. A review of long branch attraction. Cladistics 21: 163-193.

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::  D  ::

Dentinger, B. T. M., M. Y. Didukh and J.-M. Moncalvo. 2011. Comparing COI and ITS as DNA Barcode Markers for Mushrooms and Allies (Agaricomycotina). PLoS ONE 6(9): e25081 [1-8].   doi:10.1371/journal.pone.0025081

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::  E  ::

Erdman, V. A. 1978. Collection of published 5S and 5.8S ribosomal RNA sequences. Nucl. Acids Res. 5(1): r1-r13.
Erdman, V. A. 1979. Collection of published SS and 5.8S RNA sequences and their precursors. Nucl. Acids Res. 6(1): r29-r44.
Erdman, V. A. 1982. Collection of published 5S and 5.8S RNA sequences and their precursors. Nucl. Acids Res. 10(2): r93-r115.

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::  G  ::

Gardes, M. and T. D. Bruns. 1993. ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Molecular Ecol. 1993(2): 113-118.

Gottschling, M. and J. Plötner. 2004. Secondary structure models of the nuclear internal transcribed spacer regions and 5.8S rRNA in Calciodinelloideae (Peridiniaceae) and other dinoflagelllates. Nucl. Acids Res. 52(1): 307-315.   doi:10.1093/mar/gkh168

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::  H  ::

Hall, L. M. C. and B. E. H. Maden. 1980. Nucleotide sequence through the 18S-28S intergene region of a vertebrate ribosomal transcription unit. Nucl. Acids Res. 8(24): 5993-6005.

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::  K  ::

Krüger, D. and A. Gargas. 2008. Secondary structure of ITS2 rRNA provides taxonomic characters for systematic studies—a case in Lycoperdaceae (Basidiomycota). Mycol. Res. 112: 316-330.
Krüger, D., D. Kapturska, C. Fischer, R. Daniel and T. Wubet. 2012. Diversity Measures in Environmental Sequences are highly dependent on alignment quality—data from ITS and new LSU primers targeting basidiomyectes. PLoS ONE 7(2): e32139.   doi: 10.1371/journal.pone.0032139

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::  N  ::

Nagy, L. G., S. Kocsubé Z. Csanádi, G. M. Kovács, T. Petkovits, C. Vágvölgyi and T. Papp. 2012. Re-mind the gap! Insertion-deletion data reveal neglected phylogenetic potential of the nuclear ribosomal internal transcribed spacer (ITS) of Fungi. PLOS One 7(11): e49794.  [9 pp.]

Nilsson, R. H., E. Kristiansson, M. Ryberg, N. Hallenberg and K.-H. Larsson. 2008. Intraspecific ITS variability in the Kingdom Fungi as expressed in the international sequence databases and its implications for molecular species identification. Evol. Bioinform. 4: 193-201.
Nilsson, R. H., L. Tedersoo, K. Abarenkov, M. Ryberg, E. Kristiansson, M. Hartmann, C. L. Schoch, J. A. A. Nylander, J. Bersten, T. M. Porter, A. Jumpponen, P. Vaishampayan, O. Ovaskainen, N. Hallenberg, J. Bengtsson-Palme, K. M. Eriksson, K.-H. Larsson, E. Larsson, and U. Köljalg. 2012. Five simple guidelines for establishing basic authenticity and reliability of new generated fungal ITS sequences. MycoKeys 4: 37-63.   doi: 10.3897/mycokeys.4.3606

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::  P  ::

Pace, N.R., E. Schroeder, and T.A. Walker. 1977. The structure of the 5.8S RNA component of the 5.8S-28S ribosomal RNA junction complex. Biochemistry 15:5321-5328.

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::  S  ::

Schoch, C. L., K. A. Seifert, A. Huhndorf, V. Robert, J. L. Spouge, C. A. Levesque, W. Chen, and Fungal Barcoding Consortium. 2012. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proc. Nat. Acad. Sci. USA 109 (16): 6241-6246.  ; doi: 10.1073/pnas.1117018109

Skryabin, K. G., A. M. Maxam, T. D. Petes and L. Hereford. 1978. Location of the 5.8S rRNA gene of Saccharomyces cerevisiae. J. Bacteriol. 134(1): 306-309.

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::  T  ::

Taylor, J. W., D. J. Jacobson, S. Kroken, T. Kasuga, D. M. Geiser, D. S. Hibbet and M. C. Fisher. 2000. Phylogenetic species recognition and species concepts in fungi. Fung. Genet. Biol. 31: 21-32.

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::  V  ::

Vaughn, J. C. and S. J. Sperbeck. 1984. A universal model for the secondary structure of 5.8S ribosomal RNA molecules, their contact sites with 28S ribosomal RNAs, and their prokaryotic equivalent. Nucl. Acids Res. 12(19): 7479-7502.

Veldman, G. M., Klootwijk, J., V. C. H. F. de Regt, R. J. Planta, C. Branlant, A. Krol and J.-P. Ebel. 1981. The primary and secondary structure of yeast 26S rRNA. Nucl. Acids Res. 9(24): 6935-6952.

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